… of splicing phenotypes within the splicing quantification task … the splicing ratio from a set
of features associated with cell-… By default in brie-quant, we filter out events with (1) less than …

… of splicing phenotypes within the splicing quantification task itself… the splicing ratio from a set
of features associated with cell-… By default in brie-quant, we filter out events with 1) less than …

… single cells tend to express one major transcript variant of a gene, and the diversity of transcript
variants in cell … Therefore, we believe that BRIE is not suitable for testing the cell model …

… BRIE, the first and one of the very few methods for splicing quantification from scRNA-seq
[20]. … In order to quantify the exon-skipping splicing with BRIE, we need a set of good quality …

… the first time, characterization of transcriptome-wide exon-level alternative splicing events at
the … In addition to characterizing exclusion and inclusion rates across identical cells, BRIE is …

… Figure 1 Alternative splicing and gene regulatory network profiles of pancreatic islet … BRIE:
transcriptome-wide splicing quantification in single cells. Genome Biol 18, 123. Lee, Y., and …

… analyze splicing dynamics at single-cell resolution. Here, we present MARVEL, a comprehensive
R package for single-cell splicing analysis … For BRIE, differential splicing analysis was …

… The following settings were used to quantify splicing with BRIE: exons have to be located
on autosomes and input chromosomes and should not be overlapped by any other …

… transcriptome-wide studies of AS at an unprecedented scale and resolution. RNA mis-splicing …
The heterogeneity of AS in individual cells, and novel RNA splicing errors, should emerge …

… Transcriptome-wide association study (TWAS) was then used to verify the results at the DNA
level. Finally, brain imaging GWAS was used to explore the brain functional areas related to …